Title
Genomic, transcriptomic, and metabolomic analysis of Oldenlandia corymbosa reveals the biosynthesis and mode of action of anti-cancer metabolites
Date Issued
01 June 2023
Access level
open access
Resource Type
research article
Author(s)
Julca I.
Mutwil-Anderwald D.
Manoj V.
Khan Z.
Lai S.K.
Yang L.K.
Beh I.T.
Dziekan J.
Lim Y.P.
Lim S.K.
Lim S.K.
Low Y.W.
Lam Y.I.
Tjia S.
Mu Y.
Tan Q.W.
Nuc P.
Choo L.M.
Khew G.
Khew G.
Shining L.
Kam A.
Tam J.P.
Bozdech Z.
Schmidt M.
Usadel B.
Kanagasundaram Y.
Alseekh S.
Alseekh S.
Fernie A.
Fernie A.
Li H.Y.
Mutwil M.
School of Biological Sciences
School of Biological Sciences
School of Biological Sciences
School of Biological Sciences
School of Biological Sciences
A-Star, Singapore Institute of Food and Biotechnology Innovation
School of Biological Sciences
School of Biological Sciences
National University of Singapore
School of Biological Sciences
National University of Singapore
Singapore Botanic Gardens
School of Biological Sciences
School of Biological Sciences
School of Biological Sciences
School of Biological Sciences
Uniwersytet im. Adama Mickiewicza w Poznaniu
Singapore Botanic Gardens
School of Biological Sciences
Singapore Botanic Gardens
School of Biological Sciences
School of Biological Sciences
School of Biological Sciences
School of Biological Sciences
Forschungszentrum Jülich GmbH
Forschungszentrum Jülich GmbH
A-Star, Singapore Institute of Food and Biotechnology Innovation
Max Planck Institute of Molecular Plant Physiology
Center of Plant Systems Biology and Biotechnology
Max Planck Institute of Molecular Plant Physiology
Center of Plant Systems Biology and Biotechnology
School of Biological Sciences
School of Biological Sciences
Abstract
Plants accumulate a vast array of secondary metabolites, which constitute a natural resource for pharmaceuticals. Oldenlandia corymbosa belongs to the Rubiaceae family, and has been used in traditional medicine to treat different diseases, including cancer. However, the active metabolites of the plant, their biosynthetic pathway and mode of action in cancer are unknown. To fill these gaps, we exposed this plant to eight different stress conditions and combined different omics data capturing gene expression, metabolic profiles, and anti-cancer activity. Our results show that O. corymbosa extracts are active against breast cancer cell lines and that ursolic acid is responsible for this activity. Moreover, we assembled a high-quality genome and uncovered two genes involved in the biosynthesis of ursolic acid. Finally, we also revealed that ursolic acid causes mitotic catastrophe in cancer cells and identified three high-confidence protein binding targets by Cellular Thermal Shift Assay (CETSA) and reverse docking. Altogether, these results constitute a valuable resource to further characterize the biosynthesis of active metabolites in the Oldenlandia group, while the mode of action of ursolic acid will allow us to further develop this valuable compound.
Start page
1442
End page
1466
Volume
65
Issue
6
Subjects
Scopus EID
2-s2.0-85152072224
PubMed ID
Source
Journal of Integrative Plant Biology
ISSN of the container
17447909
Sources of information:
Scopus
Directorio de Producción CientÃfica