Title
Protein-DNA chimeras for single molecule mechanical folding studies with the optical tweezers
Date Issued
01 July 2008
Access level
open access
Resource Type
journal article
Author(s)
Cecconi C.
Shank E.A.
Dahlquist F.W.
Marqusee S.
University of California
Publisher(s)
Springer Nature
Abstract
Here we report on a method that extends the study of the mechanical behavior of single proteins to the low force regime of optical tweezers. This experimental approach relies on the use of DNA handles to specifically attach the protein to polystyrene beads and minimize the non-specific interactions between the tethering surfaces. The handles can be attached to any exposed pair of cysteine residues. Handles of different lengths were employed to mechanically manipulate both monomeric and polymeric proteins. The low spring constant of the optical tweezers enabled us to monitor directly refolding events and fluctuations between different molecular structures in quasi-equilibrium conditions. This approach, which has already yielded important results on the refolding process of the protein RNase H (Cecconi et al. in Science 309: 2057-2060, 2005), appears robust and widely applicable to any protein engineered to contain a pair of reactive cysteine residues. It represents a new strategy to study protein folding at the single molecule level, and should be applicable to a range of problems requiring tethering of protein molecules. © 2008 EBSA.
Start page
729
End page
738
Volume
37
Issue
6
Language
English
OCDE Knowledge area
Biofísica Bioquímica, Biología molecular
Scopus EID
2-s2.0-45849099139
PubMed ID
Source
European Biophysics Journal
ISSN of the container
01757571
Sponsor(s)
National Institute of General Medical Sciences R01GM050945 NIGMS
Sources of information: Directorio de Producción Científica Scopus