Title
Detection of diarrheagenic Escherichia coli by use of melting-curve analysis and real-time multiplex PCR
Date Issued
01 May 2008
Access level
open access
Resource Type
journal article
Abstract
Diarrheagenic Escherichia coli strains are important causes of diarrhea in children from the developing world and are now being recognized as emerging enteropathogens in the developed world. Current methods of detection are too expensive and labor-intensive for routine detection of these organisms to be practical. We developed a real-time fluorescence-based multiplex PCR for the detection of all six of the currently recognized classes of diarrheagenic E. coli. The primers were designed to specifically amplify eight different virulence genes in the same reaction: aggR for enteroaggregative E. coli, stIa/stIb and lt for enterotoxigenic E. coli, eaeA for enteropathogenic E. coli and Shiga toxin-producing E. coli (STEC), stx1 and stx2 for STEC, ipaH for enteroinvasive E. coli, and daaD for diffusely adherent E. coli (DAEC). Eighty-nine of ninety diarrheagenic E. coli and 36/36 nonpathogenic E. coli strains were correctly identified using this approach (specificity, 1.00; sensitivity, 0.99). The single false negative was a DAEC strain. The total time between preparation of DNA from E. coli colonies on agar plates and completion of PCR and melting-curve analysis was less than 90 min. The cost of materials was low. Melting-point analysis of real-time multiplex PCR is a rapid, sensitive, specific, and inexpensive method for detection of diarrheagenic E. coli. Copyright © 2008, American Society for Microbiology. All Rights Reserved.
Start page
1752
End page
1757
Volume
46
Issue
5
Language
English
OCDE Knowledge area
Pediatría Biología celular, Microbiología
Scopus EID
2-s2.0-43249088071
PubMed ID
Source
Journal of Clinical Microbiology
ISSN of the container
00951137
Sponsor(s)
Fogarty International Center - K01TW007405 Eunice Kennedy Shriver National Institute of Child Health and Human Development - R01HD051716
Sources of information: Directorio de Producción Científica Scopus