Title
Simple method to genotype the ACTN3 r577x polymorphism
Date Issued
01 May 2015
Access level
metadata only access
Resource Type
journal article
Author(s)
Schadock I.
Schneider A.
Silva E.D.
Buchweitz M.R.D.
Correa M.N.
Pesquero J.B.
Araujo R.C.
Barros C.C.
Federal University of Sao Paulo
Publisher(s)
Mary Ann Liebert Inc.
Abstract
The alpha-actinin-3 r577x polymorphism (rs1815739) is one of the most important polymorphisms associated with athletic performance. This single-nucleotide mutation leads to a premature stop codon, resulting in a nonfunctional protein product. The presence of the dominant R allele is associated with full power skeletal muscle contraction. Homozygosity for the X allele is correlated with more efficient energy disposure. Restriction fragment length polymorphism and real-time polymerase chain reaction (PCR) are the standard methods used to genotype this polymorphism, but they are expensive and require special equipments. Here, we present a simple and cost-efficient method to genotype the ACTN3 r577x polymorphism by a single PCR. External primers yield a 690-bp product that indicates the template quality. Internal primers produce a 413-bp product if the R allele is present and a 318-bp product if the X allele is present. Our four-primer genotyping PCR was validated by the standard real-time PCR, generally used to genotype this single-nucleotide polymorphism, demonstrating the accuracy of this method. This protocol is perfect for small- or large-scale cohort genotyping of the ACTN3 r577x polymorphism.
Start page
253
End page
257
Volume
19
Issue
5
Language
English
OCDE Knowledge area
Genética, Herencia
Bioquímica, Biología molecular
Scopus EID
2-s2.0-84929409771
PubMed ID
Source
Genetic Testing and Molecular Biomarkers
ISSN of the container
19450265
Sources of information:
Directorio de Producción Científica
Scopus