Title
Complete genome sequence of Shewanella algae strain 2NE11, a decolorizing bacterium isolated from industrial effluent in Peru
Date Issued
01 March 2022
Access level
open access
Resource Type
journal article
Publisher(s)
Elsevier B.V.
Abstract
Shewanella is a microbial group with high potential to be applied in textile effluents bioremediation due to its ability to use a wide variety of substrates as a final electron acceptor in respiration. The present research aimed to describe a new strain, Shewanella algae 2NE11, a decolorizing bacterium isolated from industrial effluent in Peru. S. algae 2NE11 showed an optimal growth under pH 6-9, temperature between 30-40 °C, and 0-4 % NaCl. It can tolerate high concentrations of NaCl until 10% and low temperatures as 4 °C. It decolorizes azo and anthraquinone dyes with a decolorization rate of 89-97%. We performed next-generation sequencing (Pacific Bioscience®) and achieved its complete genome sequence with a length of 5,030,813bp and a GC content of 52.98%. Genomic characterization revealed the presence of protein-coding genes related to decolorization like azoreductase, dyp-peroxidase, oxidoreductases, and the complete Mtr respiratory pathway. Likewise, we identified other properties such as the presence of metal resistant genes, and genes related to lactate and N-acetylglucosamine metabolism. These results highlight its potential to be applied in the bioremediation of textile effluents and guide future research on decolorization metabolic pathways.
Volume
33
Language
English
OCDE Knowledge area
Biotecnología agrícola, Biotecnología alimentaria Biología celular, Microbiología
Scopus EID
2-s2.0-85123859370
Source
Biotechnology Reports
ISSN of the container
2215017X
Sponsor(s)
This research was partially funded by the Vicerrectorado de Investigaci?n y Posgrado (VRIP) of the Universidad Nacional Mayor de San Marcos (UNMSM) [Grant number: B18100014]. Completely financial support was made by the Consejo Nacional de Ciencia, Tecnolog?a e Innovaci?n Tecnol?gica (CONCYTEC) [Grant number: 156-2017-FONDECYT]. The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Pablo Ramirez reports financial support was provided by Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica. Wendy Lizarraga reports financial support was provided by National University of San Marcos Biological Sciences Faculty. Pablo Ramirez reports a relationship with Consejo Nacional de Ciencia y Tecnología that includes: funding grants. Pablo Ramirez reports a relationship with National University of San Marcos Biological Sciences Faculty that includes: employment, funding grants, and speaking and lecture fees.
Sources of information: Directorio de Producción Científica Scopus