Title
Deciphering the molecular mechanism of the bacteriophage φ29 DNA packaging motor
Date Issued
01 January 2017
Access level
metadata only access
Resource Type
book part
Author(s)
Universidad de California
Publisher(s)
Humana Press Inc.
Abstract
The past decade has seen an explosion in the use of single-molecule approaches to study complex biological processes. One such approach—optical trapping—is particularly well suited for investigating molecular motors, a diverse group of macromolecular complexes that convert chemical energy into mechanical work, thus playing key roles in virtually every aspect of cellular life. Here we describe how to use high-resolution optical tweezers to investigate the mechanism of the bacteriophage φ29 DNA packaging motor, a ringshaped ATPase responsible for genome packing during viral assembly. This system illustrates how to use single-molecule techniques to uncover novel, often unexpected, principles of motor operation.
Start page
343
End page
355
Volume
1486
Language
English
OCDE Knowledge area
Bioquímica, Biología molecular
Scopus EID
2-s2.0-84995593618
PubMed ID
Resource of which it is part
Methods in Molecular Biology
ISSN of the container
1064-3745
Sponsor(s)
We thank Shelley Grimes, Paul Jardine, and Dwight Anderson for developing the in vitro packaging system and critically reading the manuscript. We thank Gheorghe Chistol, Craig Hetherington, Jeffrey Moffitt, Yann Chemla, Aathavan Karunakaran, Douglas Smith, Sander Tans, Adam Politzer, Ariel Kaplan, Thorsten Hugel, Jens Michaelis, and Steven Smith for their contributions to the development of the single-molecule packaging assay, optical tweezers instrumentation, and data analysis tools. The authors are supported by NIH grants R01GM071552 (to C.B.) and K99GM107365 (to S.L.) and a UC MEXUS-CONACYT doctoral fellowship (to S.T.). C.B. is a Howard Hughes Medical Institute investigator.
Sources of information: Directorio de Producción Científica Scopus