Title
Determination of the diversity of rhodopirellula isolates from european seas by multilocus sequence analysis
Date Issued
01 February 2010
Access level
open access
Resource Type
journal article
Author(s)
Winkelmann N.
Jaekel U.
Meyer C.
Rachel R.
Rosselló-Mora R.
Harder J.
University of Bremen
Abstract
In the biogeography of microorganisms, the habitat size of an attached-living bacterium has never been investigated. We approached this theme with a multilocus sequence analysis (MLSA) study of new strains of Rhodopirellula sp., an attached-living planctomycete. The development of an MLSA for Rhodopirellula baltica enabled the characterization of the genetic diversity at the species level, beyond the resolution of the 16S rRNA gene. The alleles of the nine housekeeping genes acsA, guaA, trpE,purH, glpF,fumC, icd, glyA, and mdh Indicated the presence of 13 genetically defined operational taxonomic units (OTUs) in our culture collection. The MLSA-based OTUs coincided with the taxonomic units defined by DNA-DNA hybridization experiments. BOX-PCR supported the MLSA-based differentiation of two closely related OTUs. This study established a taxon-area relationship of cultivable Rhodopirellula species. In European seas, three closely related species covered the Baltic Sea and the eastern North Sea, the North Atlantic region, and the southern North Sea to the Mediterranean. The last had regional genotypes, as revealed by BOX-PCR. This suggests a limited habitat size of attached-living Rhodopirellula species. Copyright © 2010, American Society for Microbiology. All Rights Reserved.
Start page
776
End page
785
Volume
76
Issue
3
Language
English
OCDE Knowledge area
Biología marina, Biología de agua dulce, Limnología
Scopus EID
2-s2.0-75749131610
PubMed ID
Source
Applied and Environmental Microbiology
ISSN of the container
00992240
Sources of information: Directorio de Producción Científica Scopus