Title
Using a system's equilibrium behavior to reduce its energy dissipation in nonequilibrium processes
Date Issued
01 January 2019
Access level
open access
Resource Type
journal article
Author(s)
Tafoya S.
Large S.J.
Liu S.
Sivak D.A.
University of California
Publisher(s)
National Academy of Sciences
Abstract
Cells must operate far from equilibrium, utilizing and dissipating energy continuously to maintain their organization and to avoid stasis and death. However, they must also avoid unnecessary waste of energy. Recent studies have revealed thatmolecular machines are extremely efficient thermodynamically compared with their macroscopic counterparts. However, the principles governing the efficient out-of-equilibrium operation of molecular machines remain a mystery. A theoretical framework has been recently formulated inwhich a generalized friction coefficient quantifies the energetic efficiency in nonequilibrium processes. Moreover, it posits that, to minimize energy dissipation, external control should drive the system along the reaction coordinate with a speed inversely proportional to the square root of that friction coefficient. Here, we demonstrate the utility of this theory for designing and understanding energetically efficient nonequilibrium processes through the unfolding and folding of single DNA hairpins.
Start page
5920
End page
5924
Volume
116
Issue
13
Language
English
OCDE Knowledge area
Biología celular, Microbiología Biofísica
Scopus EID
2-s2.0-85063962045
PubMed ID
Source
Proceedings of the National Academy of Sciences of the United States of America
ISSN of the container
00278424
Sponsor(s)
ACKNOWLEDGMENTS. We thank Nancy Forde, John Bechhoefer, Aidan Brown, and Kamdin Mirsanaye (Simon Fraser University); Michael Woodside (University of Alberta); and Ronen Gabizon and Antony Lee (University of California, Berkeley) for useful discussions. This work is supported in part by the Nanomachines program (KC1203) funded by the office of Basic Energy Sciences of the US Department of Energy [contract no. DE-AC02-05CH11231 (to C.B.)]; the University of California Mexus graduate fellowship (to S.T.); Natural Sciences and Engineering Research Council of Canada (NSERC) Canada Graduate Scholarships-Master's and Alexander Graham Bell Canada Graduate Scholarships-Doctoral (to S.J.L.); the Howard Hughes Medical Institute (C.B.); an NSERC Discovery Grant (to D.A.S.); the Faculty of Science, Simon Fraser University through President’s Research Startup Grant (to D.A.S.); and a Tier-II Canada Research Chair (D.A.S.).
Sources of information: Directorio de Producción Científica Scopus