Title
Gene ranking from microarray data for cancer classification-A machine learning approach
Date Issued
01 January 2006
Access level
open access
Resource Type
conference paper
Author(s)
Ruiz R.
Pontes B.
Giráldez R.
University of Pablo de Olavide
Publisher(s)
Springer Verlag
Abstract
Traditional gene selection methods often select the top-ranked genes according to their individual discriminative power. We propose to apply feature evaluation measure broadly used in the machine learning field and not so popular in the DNA microarray field. Besides, the application of sequential gene subset selection approaches is included. In our study, we propose some well-known criteria (filters and wrappers) to rank attributes, and a greedy search procedure combined with three subset evaluation measures. Two completely different machine learning classifiers are applied to perform the class prediction. The comparison is performed on two well-known DNA microarray data sets. We notice that most of the top-ranked genes appear in the list of relevant-informative genes detected by previous studies over these data sets. © Springer-Verlag Berlin Heidelberg 2006.
Start page
1272
End page
1280
Volume
4252 LNAI - II
Language
English
OCDE Knowledge area
Ciencias de la computación Genética, Herencia
Scopus EID
2-s2.0-33750694678
ISBN
3540465375 9783540465379
ISSN of the container
03029743
Conference
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Sources of information: Directorio de Producción Científica Scopus