Title
The heat released during catalytic turnover enhances the diffusion of an enzyme
Date Issued
08 January 2015
Access level
open access
Resource Type
journal article
Author(s)
Riedel C.
Gabizon R.
Wilson C.A.M.
Hamadani K.
Tsekouras K.
Marqusee S.
Pressé S.
University of California
Publisher(s)
Nature Publishing Group
Springer Nature
Abstract
Recent studies have shown that the diffusivity of enzymes increases in a substrate-dependent manner during catalysis<sup>1,2</sup>. Although this observation has been reported and characterized for several different systems<sup>3-10</sup>, the precise origin of this phenomenon is unknown. Calorimetric methods are often used to determine enthalpies from enzyme-catalysed reactions and can therefore provide important insight into their reaction mechanisms<sup>11,12</sup>. The ensemble averages involved in traditional bulk calorimetry cannot probe the transient effects that the energy exchanged in a reaction may have on the catalyst. Here we obtain single-molecule fluorescence correlation spectroscopy data and analyse them within the framework of a stochastic theory to demonstrate a mechanistic link between the enhanced diffusion of a single enzyme molecule and the heat released in the reaction. We propose that the heat released during catalysis generates an asymmetric pressure wave that results in a differential stress at the protein-solvent interface that transiently displaces the centre-of-mass of the enzyme (chemoacoustic effect). This novel perspective on how enzymes respond to the energy released during catalysis suggests a possible effect of the heat of reaction on the structural integrity and internal degrees of freedom of the enzyme.
Start page
227
End page
230
Volume
517
Issue
7533
Language
English
OCDE Knowledge area
Biofísica Bioquímica, Biología molecular
Scopus EID
2-s2.0-84923379492
PubMed ID
Source
Nature
ISSN of the container
00280836
Sponsor(s)
Acknowledgements We thank A. Sen for discussions of his experiments. We thank J. Kirsch, R. Golestanian, D. Leitner, J. Kirsdu, P. Geissler, P. Nelson and A.Szabofor their feedbackonthiswork,J.Liphardtfor the405-nmlaser line,P.Harbury for the TIM plasmid and B. Maguire for the TIM expression. This research was supportedinpartbyNIHgrants R01-GM0325543(C.B.)andR01-GM05945(S.M.),the US Department of Energy, Office of Basic Energy Sciences, Division of Materials Sciences and Engineering under contract no. DE-AC02-05CH11231 (C.B.), and the NSF grants MCB-1412259 (S.P.) and MCB-1122225 (S.M.). K.M.H. was supported in part by grant NIGMS, R01-GM65050. C.R. acknowledges the support of the Human Frontier Science Program. S.P. further acknowledges support from the Burroughs-Wellcome Fund.
Sources of information: Directorio de Producción Científica Scopus