Title
Molecular switch-like regulation enables global subunit coordination in a viral ring ATPase
Date Issued
31 July 2018
Access level
open access
Resource Type
journal article
Author(s)
Tafoya S.
Liu S.
Castillo J.P.
Atz R.
Morais M.C.
Grimes S.
Jardine P.J.
University of California
Publisher(s)
National Academy of Sciences
Abstract
Subunits in multimeric ring-shaped motors must coordinate their activities to ensure correct and efficient performance of their mechanical tasks. Here, we study WT and arginine finger mutants of the pentameric bacteriophage φ29 DNA packaging motor. Our results reveal the molecular interactions necessary for the coordination of ADP–ATP exchange and ATP hydrolysis of the motor’s biphasic mechanochemical cycle. We show that two distinct regulatory mechanisms determine this coordination. In the first mechanism, the DNA up-regulates a single subunit’s catalytic activity, transforming it into a global regulator that initiates the nucleotide exchange phase and the hydrolysis phase. In the second, an arginine finger in each subunit promotes ADP–ATP exchange and ATP hydrolysis of its neighbor. Accordingly, we suggest that the subunits perform the roles described for GDP exchange factors and GTPase-activating proteins observed in small GTPases. We propose that these mechanisms are fundamental to intersubunit coordination and are likely present in other ring ATPases.
Start page
7961
End page
7966
Volume
115
Issue
31
Language
English
OCDE Knowledge area
Bioquímica, Biología molecular
Subjects
Scopus EID
2-s2.0-85051736166
PubMed ID
Source
Proceedings of the National Academy of Sciences of the United States of America
ISSN of the container
00278424
Sponsor(s)
and application of step-finding algorithms). This work is also funded, in part, by National Institute of Health grants R01GM071552 (fluorescent protein FRET characterization) and R01GM032543 (fluorescent protein X-ray characterization), and by the Howard Hughes Medical Institute (fluorescent protein counting). S.T. acknowledges the University of California Institute for Mexico and the United States (UC MEXUS) for a graduate fellowship, S.L. acknowledges support from US NIH Pathway to Independence Award R00-GM107365, and J.P.C. acknowledges the Pew Scholar Fellowship.
Sources of information:
Directorio de Producción Científica
Scopus