Title
Multiplex real-time PCR for detection of Campylobacter, Salmonella, and Shigella
Date Issued
01 September 2013
Access level
open access
Resource Type
journal article
Author(s)
Hospital Clínico de la Universidad de Barcelona
Abstract
Infectious diarrhea can be classified based on its clinical presentation as noninflammatory or inflammatory disease. In developing countries, among inflammatory diarrhea cases, Shigella is the most common cause, followed by Campylobacter and Salmonella. Because the time frame in which treatment choices must be made is short and conventional stool cultures lack good sensitivity, there is a need for a rapid, sensitive, and inexpensive detection technique. The purpose of our study was to develop a multiplex real-time PCR procedure to simultaneously identify Campylobacter spp., Salmonella spp., and Shigella spp. Primers were designed to amplify the invA, ipaH, and 16S rRNA genes simultaneously in a single reaction to detect Salmonella, Shigella, and Campylobacter, respectively. Using this approach, we correctly identified 102 of 103 strains of the targeted enteropathogens and 34 of 34 other pathogens. The melting temperatures were 82.96±0.05°C for invA, 85.56±0. 28°C for ipaH, and 89.21± 0.24°C for 16S rRNA. The limit of accurate quantification for the assay in stool samples was 104 CFU g-1; however, the limit of detection was 103 CFU g -1. This assay is a simple, rapid, inexpensive, and reliable system for the practical detection of these three enteropathogens in clinical specimens. Copyright © 2013, American Society for Microbiology. All Rights Reserved.
Start page
2822
End page
2829
Volume
51
Issue
9
Language
English
OCDE Knowledge area
Virología
Scopus EID
2-s2.0-84882807918
PubMed ID
Source
Journal of Clinical Microbiology
ISSN of the container
1098660X
Sponsor(s)
Fogarty International Center K01TW007405
Sources of information:
Directorio de Producción Científica
Scopus