Title
Characterization of 16 microsatellite markers for the Oreinotinus Clade of Viburnum (Adoxaceae)
Date Issued
01 December 2016
Access level
open access
Resource Type
journal article
Author(s)
Publisher(s)
Botanical Society of America Inc.
Abstract
Premise of the study: Microsatellite loci were isolated from four species of Viburnum (Adoxaceae) to study population structure and assess species boundaries among morphologically similar South American Viburnum species of the Oreinotinus clade. Methods and Results: Using a microsatellite-enriched library and mining next-generation sequence data, 16 microsatellites were developed. Each locus was tested on two populations of V. triphyllum and one population of V. pichinchense. For nuclear loci, one to 13 alleles were recovered, expected heterozygosity ranged from 0 to 0.8975, Simpson diversity index ranged from 0.0167 to 1.000, and Shannon diversity index ranged from 0 to 2.3670 in a given population. For the mitochondrial locus, three to six alleles were recovered and unbiased haploid diversity values ranged from 0.756 to 0.853 in a given population. Conclusions: The 16 microsatellite loci developed for the Oreinotinus clade (Viburnum, Adoxaceae) will inform investigations of population structure and species boundaries within this group.
Volume
4
Issue
12
Number
1600103
Language
English
OCDE Knowledge area
Ciencias de las plantas, Botánica
Subjects
Scopus EID
2-s2.0-85004074743
Source
Applications in Plant Sciences
ISSN of the container
21680450
Sponsor(s)
National Science Foundation - NSF
Directorate for Biological Sciences - 1026611, 1145606 - BIO
Sources of information:
Directorio de Producción CientÃfica
Scopus