Title
The role of solvation models on the computed absorption and emission spectra: The case of fireflies oxyluciferin
Date Issued
2019
Access level
metadata only access
Resource Type
journal article
Author(s)
Université de Reims Champagne-Ardenne
Publisher(s)
Royal Society of Chemistry
Abstract
Surrounding effects are crucial to successfully simulate the absorption and emission spectra of molecular systems. In this work we test different solvation models to compute transition energies and to simulate the spectra of oxyluciferin responsible for the light emission in fireflies and its derivatives. We demonstrate that, within the PCM model, the IBSF formalism is suitable for computing the transition energies of the oxyluciferin chemical forms characterized by a charge transfer character. On the other hand, the LR approach could be used for the chemical forms where an almost negligible charge transfer takes place. Moreover, we demonstrate that explicit solvation models, applied by QM/MM calculations, are needed to accurately reproduce the experimental shape of the spectra. Finally, the vibrationally resolved spectra using a solvation model (implicit or microsolvation) is computed. Some noticeable differences arise when considering the implicit solvation with respect to gas phase vibrational spectra, while small changes were found when explicit water molecules within a microsolvated model are considered.
Start page
4613
End page
4623
Volume
21
Issue
8
Language
English
OCDE Knowledge area
Bioquímica, Biología molecular
Física atómica, molecular y química
Scopus EID
2-s2.0-85061868887
PubMed ID
Source
Physical Chemistry Chemical Physics
ISSN of the container
14639076
Sponsor(s)
Cristina García-Iriepa acknowledge Fundación Ramón Areces for a postdoctoral fellowship. Isabelle Navizet acknowledge support from the French Agence Nationale de la Recherche ANR BIOLUM project (ANR-16-CE29-0013).
Sources of information:
Directorio de Producción Científica
Scopus