Title
New MiniPromoter Ple345 (NEFL) drives strong and specific expression in retinal ganglion cells of mouse and primate retina
Date Issued
01 March 2019
Access level
open access
Resource Type
journal article
Author(s)
Simpson E.M.
Korecki A.J.
Fornes O.
McGill T.J.
Agostinone J.
Farkas R.A.
Hickmott J.W.
Lam S.L.
Mathelier A.
Renner L.M.
Stoddard J.
Zhou M.
Di Polo A.
Neuringer M.
Wasserman W.W.
Université de Montréal
Publisher(s)
Mary Ann Liebert Inc.
Abstract
Retinal gene therapy is leading the neurological gene therapy field, with 32 ongoing clinical trials of recombinant adeno-associated virus (rAAV)-based therapies. Importantly, over 50% of those trials are using restricted promoters from human genes. Promoters that restrict expression have demonstrated increased efficacy and can limit the therapeutic to the target cells thereby reducing unwanted off-target effects. Retinal ganglion cells are a critical target in ocular gene therapy; they are involved in common diseases such as glaucoma, rare diseases such as Leber's hereditary optic neuropathy, and in revolutionary optogenetic treatments. Here, we used computational biology and mined the human genome for the best genes from which to develop a novel minimal promoter element(s) designed for expression in restricted cell types (MiniPromoter) to improve the safety and efficacy of retinal ganglion cell gene therapy. Gene selection included the use of the first available droplet-based single-cell RNA sequencing (Drop-seq) dataset, and promoter design was bioinformatically driven and informed by a wide range of genomics datasets. We tested seven promoter designs from four genes in rAAV for specificity and quantified expression strength in retinal ganglion cells in mouse, and then the single best in nonhuman primate retina. Thus, we developed a new human-DNA MiniPromoter, Ple345 (NEFL), which in combination with intravitreal delivery in rAAV9 showed specific and robust expression in the retinal ganglion cells of the nonhuman-primate rhesus macaque retina. In mouse, we also developed MiniPromoters expressing in retinal ganglion cells, the hippocampus of the brain, a pan neuronal pattern in the brain, and peripheral nerves. As single-cell transcriptomics such as Drop-seq become available for other cell types, many new opportunities for additional novel restricted MiniPromoters will present.
Start page
257
End page
272
Volume
30
Issue
3
Language
English
OCDE Knowledge area
Genética, Herencia Genética humana
Scopus EID
2-s2.0-85062621243
PubMed ID
Source
Human Gene Therapy
ISSN of the container
10430342
Sponsor(s)
This work was supported by Brain Canada through the Canada Brain Research Fund, with the financial support of Health Canada and the Consortium Québécois sur la Découverte du Méd-icament; the National Institutes of Health core grants (P30 EY010572 to the Casey Eye Institute, P51OD011092 to the Oregon National Primate Research Center); and Research to Prevent Blindness [unrestricted grant to the Casey Eye Institute]. The views expressed herein do not necessarily represent the views of the Minister of Health or the Government of Canada.
Sources of information: Directorio de Producción Científica Scopus