Title
Evolutionary protein contact maps prediction based on amino acid properties
Date Issued
07 June 2011
Access level
open access
Resource Type
conference paper
Author(s)
Chamorro A.E.M.
Divina F.
Universidad Pablo de Olavide
Abstract
Protein structure prediction is one of the main challenges in Bioinformatics. An useful representation for protein 3D structure is the protein contact map. In this work, we propose an evolutionary approach for contact map prediction based on amino acids physicochemical properties. The evolutionary algorithm produces a set of rules that identifies contacts between amino acids. The rules obtained by the algorithm imposes a set of conditions on four amino acid properties in order to predict contacts. Results obtained confirm the validity of the proposal. © 2011 Springer-Verlag.
Start page
303
End page
310
Volume
6679 LNAI
Issue
PART 2
Language
English
OCDE Knowledge area
Bioinformática
Scopus EID
2-s2.0-79957925630
Source
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
ISSN of the container
03029743
ISBN of the container
9783642212215
Conference
6th International Conference on Hybrid Artificial Intelligence Systems, HAIS 2011
Sources of information: Directorio de Producción Científica Scopus