Title
Substrate-translocating loops regulate mechanochemical coupling and power production in AAA+ protease ClpXP
Date Issued
01 November 2016
Access level
open access
Resource Type
journal article
Author(s)
University of California at Berkeley
University of California at Berkeley
Publisher(s)
Nature Publishing Group
Abstract
ATP-dependent proteases of the AAA+ family, including Escherichia coli ClpXP and the eukaryotic proteasome, contribute to maintenance of cellular proteostasis. ClpXP unfolds and translocates substrates into an internal degradation chamber, using cycles of alternating dwell and burst phases. The ClpX motor performs chemical transformations during the dwell and translocates the substrate in increments of 1-4 nm during the burst, but the processes occurring during these phases remain unknown. Here we characterized the complete mechanochemical cycle of ClpXP, showing that ADP release and ATP binding occur nonsequentially during the dwell, whereas ATP hydrolysis and phosphate release occur during the burst. The highly conserved translocating loops within the ClpX pore are optimized to maximize motor power generation, the coupling between chemical and mechanical tasks, and the efficiency of protein processing. Conformational resetting of these loops between consecutive bursts appears to determine ADP release from individual ATPase subunits and the overall duration of the motor's cycle.
Start page
974
End page
981
Volume
23
Issue
11
Language
English
OCDE Knowledge area
BioquÃmica, BiologÃa molecular
BiologÃa
Scopus EID
2-s2.0-84988689906
PubMed ID
Source
Nature Structural and Molecular Biology
ISSN of the container
15459993
Sponsor(s)
We thank the members of the Bustamante laboratory S. Liu, R. Gabizon, and S. Tafoya for helpful discussions. We also acknowledge M. Sen, K. Nyquist, and R. Maillard for the data obtained with ATP-γS. This research was supported by NIH grants R01GM071552 and R01GM032543 (C.B.; mechanochemistry of molecular motors), NIH grant R01-GM094497 (A.M.; ATP-dependent protein degradation by AAA+ proteases), the Searle Scholars Program (A.M.), the Howard Hughes Medical Institute (C.B. and A.M.; laboratory infrastructure and support) and the US Department of Energy Office of Basic Energy Sciences Nanomachine Program, under contract no. DE-AC02-05CH11231 (C.B.; optical-tweezers development).
Sources of information:
Directorio de Producción CientÃfica
Scopus