Title
Effect of force on mononucleosomal dynamics
Date Issued
24 October 2006
Access level
open access
Resource Type
journal article
Author(s)
Universidad de California
Publisher(s)
National Academy of Sciences
Abstract
Using single-molecule optical-trapping techniques, we examined the force-induced dynamic behavior of a single nucleosome core particle. Our experiments using the DNA construct containing the 601 nucleosome-positioning sequence revealed that the nucleosome unravels in at least two major stages. The first stage, which we attributed to the unraveling of the first DNA wrap around the histone octamer, could be mechanically induced in a reversible manner, and when kept at constant force within a critical force range, exhibited two-state hopping behavior. From the hopping data, we determined the force-dependent equilibrium constant and rates for opening/closing of the outer wrap. Our investigation of the second unraveling event at various loading rates, which we attributed to the inner DNA wrap, revealed that this unraveling event cannot be described as a simple two-state process. We also looked at the behavior of the mononucleosome in a high-salt buffer, which revealed that the outer DNA wrap is more sensitive to changes in the ionic environment than the inner DNA wrap. These findings are needed to understand the energetics of nucleosome remodeling. © 2006 by The National Academy of Sciences of the USA.
Start page
15871
End page
15876
Volume
103
Issue
43
Language
English
OCDE Knowledge area
Química física
Física atómica, molecular y química
Subjects
Scopus EID
2-s2.0-33750449330
PubMed ID
Source
Proceedings of the National Academy of Sciences of the United States of America
ISSN of the container
00278424
Sponsor(s)
National Institute of General Medical Sciences R01GM071552
Sources of information:
Directorio de Producción Científica
Scopus