Title
A two-state kinetic model for the unfolding of single molecules by mechanical force
Date Issued
15 October 2002
Access level
open access
Resource Type
journal article
Author(s)
University of California
Publisher(s)
National Academy of Sciences
Abstract
We investigate the work dissipated during the irreversible unfolding of single molecules by mechanical force, using the simplest model necessary to represent experimental data. The model consists of two levels (folded and unfolded states) separated by an intermediate barrier. We compute the probability distribution for the dissipated work and give analytical expressions for the average and variance of the distribution. To first order, the amount of dissipated work is directly proportional to the rate of application of force (the loading rate) and to the relaxation time of the molecule. The model yields estimates for parameters that characterize the unfolding kinetics under force in agreement with those obtained in recent experimental results. We obtain a general equation for the minimum number of repeated experiments needed to obtain an equilibrium free energy, to within kBT, from nonequilibrium experiments by using the Jarzynski formula. The number of irreversible experiments grows exponentially with the ratio of the average dissipated work, Wdis to kBT.
Start page
13544
End page
13548
Volume
99
Issue
21
Language
English
OCDE Knowledge area
Bioquímica, Biología molecular Nano-tecnología
Scopus EID
2-s2.0-0037109040
PubMed ID
Source
Proceedings of the National Academy of Sciences of the United States of America
ISSN of the container
0027-8424
Sponsor(s)
National Institute of General Medical Sciences R37GM032543 NIGMS
Sources of information: Directorio de Producción Científica Scopus