Title
January Whole genome sequencing of peruvian Klebsiella pneumoniae identifies novel plasmid vectors bearing carbapenem resistance gene NDM
Date Issued
01 August 2020
Access level
open access
Resource Type
journal article
Author(s)
Roach D.
Waalkes A.
Zunt J.
Cucho C.
Salipante S.J.
Abstract
Background. Klebsiella pneumoniae is a bacterial pathogen with increasing rates of resistance to carbapenem antibiotics, but the population structure and genetic drivers of carbapenem-resistant K pneumoniae (CRKP) remain underexplored in developing countries. Carbapenem-resistant K pneumoniae were recently introduced into Peru but have grown rapidly in prevalence, enabling study of this pathogen as it expands into an unaffected environment. Methods. In this study, using whole genome sequencing, we show that 3 distinct lineages encompass almost all CRKP identified in the hospital where it was first reported in Peru. Results. The most prevalent lineage, ST348, has not been described outside of Europe, raising concern for global dissemination. We identified metallo- β -lactamase NDM-1 as the primary carbapenem resistance effector, which was harbored on a novel vector resulting from recombination between 2 different plasmids, pKP1-NDM-1 and pMS7884A. Conclusions. This study is the first of its kind performed in Peru, and it furthers our understanding of the landscape of CRKP infections in Latin America.
Volume
7
Issue
8
Language
English
OCDE Knowledge area
Medicina clínica
Subjects
Scopus EID
2-s2.0-85092077936
Source
Open Forum Infectious Diseases
Sources of information:
Directorio de Producción Científica
Scopus