Title
Genetic characterisation and analysis of infectious bronchitis virus isolated from Brazilian flocks between 2010 and 2015
Date Issued
02 November 2017
Access level
metadata only access
Resource Type
journal article
Author(s)
Astolfi-Ferreira C.
Santander Parra S.
Nuñez L.
Penzes Z.
Chacón J.
Sesti L.
Piantino Ferreira A.
University of São Paulo
CEVA Animal Health
Publisher(s)
Taylor and Francis Ltd.
Abstract
1. Infectious bronchitis virus (IBV) variants in Brazil were isolated during 2010–2015 for epidemiological and molecular analysis to characterise the different variants and perform a bioinformatic analysis to compare with sequences of variants collected over the previous 40 years. 2. Of the 453 samples examined, 61.4% were positive for IBV and 75.9% of these were considered to have the BR-I genotype and were detected in birds of all ages distributed in all five Brazilian regions. 3. The ratio of non-synonymous substitutions per non-synonymous site (dN) to synonymous substitutions per synonymous site (dS), i.e. dN/dS, revealed a predominance of codons with non-synonymous substitutions in the first third of the S1 gene and a dN/dS ratio of 0.67. Additionally, prediction of N-glycosylation sites showed that most of the BR-I variants (from 2003 to early 2014) had an extra site at amino acid position 20, whereas the newest variants lacked this extra site. 4. These results suggest that Brazilian IBV variants probably underwent drastic mutations at various points between 1983 and 2003 and that the selection processes became silent after achieving a sufficiently effective antigenic structure for invasion and replication in their hosts. Brazilian IBV genotype BR-I is currently the predominant genotype circulating in Brazil and South America.
Start page
610
End page
623
Volume
58
Issue
6
Language
English
OCDE Knowledge area
Ciencias médicas, Ciencias de la salud
Scopus EID
2-s2.0-85031492278
PubMed ID
Source
British Poultry Science
ISSN of the container
00071668
Sponsor(s)
This work was supported by the Conselho Nacional de Desenvolvimento Científico e Tecnológico [453920/2014-4].
Sources of information: Directorio de Producción Científica Scopus