Title
Complete sequence and variability of a new subgroup B nepovirus infecting potato in central Peru
Date Issued
01 March 2017
Access level
open access
Resource Type
journal article
Publisher(s)
Springer-Verlag Wien
Abstract
The complete bipartite genome (RNA1 and RNA2) of a new nepovirus infecting potato was obtained using small RNA sequencing and assembly complemented by Sanger sequencing. Each RNA encodes a single polyprotein, flanked by 5’ and 3’ untranslate regions (UTR) and followed by a poly (A) tail. The putative polyproteins encoded by RNA1 and RNA2 had sets of motifs which are characteristic of viruses in the genus Nepovirus. Sequence comparisons using the Pro-Pol region and the coat protein, including phylogenetic analysis of these regions, showed closest relationships with nepoviruses. The data obtained support the taxonomical status of this new virus (putative named Potato virus B, PVB) as a member of the genus Nepovirus, subgroup B.
Start page
885
End page
889
Volume
162
Issue
3
Language
English
OCDE Knowledge area
Virología Bioquímica, Biología molecular
Scopus EID
2-s2.0-84995768428
PubMed ID
Source
Archives of Virology
ISSN of the container
03048608
Sources of information: Directorio de Producción Científica Scopus