Title
Synthesis of 1,N<sup>6</sup>Ethano-2′-deoxyadenosine, a Metabolic Product of 1,3-Bis(2-chloroethyl)nitrosourea, and Its Incorporation into Oligomeric DNA
Date Issued
26 June 1998
Access level
metadata only access
Resource Type
journal article
Author(s)
Chenna A.
Liem L.K.
Singer B.
University of California
Publisher(s)
American Chemical Society
Abstract
1,N6-Ethano-2′-deoxyadenosine (1) is one of the adducts formed during DNA reaction with the antitumor agent, 1,3-bis(2-chloroethyl)nitrosourea (BCNU), and was synthesized and incorporated into a site-specific deoxyoligonucleotide for the first time. The product 6-chloropurine-2′- deoxyriboside (11) was prepared in high yield by the reaction of 2′-deoxyinosine (6) with SOCl2, which then was derivatized to give compound 12 using tert-butyldimethylsilyl chloride, which was then reacted with 2-hydroxyethylamine to produce compound 13 in 86% yield. Reaction of 13 with (PhO)3P-MeI- in DMF gave the cyclized 1,N6-ethano derivative 10 in 67% yield. Desilylation of 10 with triethylamine trihydrofluoride in THF gave 1N6-ethano-dA (1) in 91% yield. Tritylation of compound 1 with DMT+BF4- gave the 5′-O-DMT product 14 in 62% yield, which then was phosphitylated with 2-cyanoethyl N,N-diisopropylchlorophosphoramidite, which yielded a 1:1 mixture of the diastereoisomers 15 in 71% yield. This fully protected compound 15 was incorporated site-specifically into a 25-mer oligonucleotide. The coupling efficiency of ethano-dA phosphoramidite was 93%. Enzymatic hydrolysis and analysis by HPLC confirmed the incorporation of ethano-dA and base composition of the DNA oligomer. The latter is now under investigation for its biochemical and physical properties.
Start page
4385
End page
4389
Volume
63
Issue
13
Language
English
OCDE Knowledge area
Tecnología para la identificación y funcionamiento del ADN, proteínas y enzimas y como influencian la enfermedad) Química analítica
Scopus EID
2-s2.0-0032569071
Source
Journal of Organic Chemistry
ISSN of the container
00223263
Sources of information: Directorio de Producción Científica Scopus